Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 AC074338.1-201ENST00000416825 156 ntBASIC16.93■□□□□ 0.3
TLR9Q9NR96 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 AC134915.1-201ENST00000426461 574 ntBASIC16.93■□□□□ 0.3
TLR9Q9NR96 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 RPL7P3-201ENST00000441388 714 ntBASIC16.93■□□□□ 0.3
TLR9Q9NR96 AL355864.2-201ENST00000447420 863 ntBASIC16.93■□□□□ 0.3
TLR9Q9NR96 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 AL139384.1-201ENST00000612143 3047 ntBASIC16.93■□□□□ 0.3
TLR9Q9NR96 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TLR9Q9NR96 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TLR9Q9NR96 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 AP001889.1-201ENST00000525414 633 ntBASIC16.92■□□□□ 0.3
TLR9Q9NR96 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 AC124283.3-201ENST00000570869 594 ntBASIC16.92■□□□□ 0.3
TLR9Q9NR96 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.92■□□□□ 0.3
TLR9Q9NR96 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TLR9Q9NR96 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 AC020907.1-201ENST00000616460 1350 ntBASIC16.91■□□□□ 0.3
TLR9Q9NR96 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 AC092506.1-202ENST00000401022 528 ntBASIC16.91■□□□□ 0.3
TLR9Q9NR96 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 POU5F1P6-201ENST00000466990 990 ntBASIC16.91■□□□□ 0.3
TLR9Q9NR96 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms