Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FO393414.2-201ENST00000405153 598 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 ACTG1P3-201ENST00000431775 1114 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 RN7SL399P-201ENST00000471648 279 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AC243562.2-201ENST00000561247 970 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AL391069.4-201ENST00000609583 481 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 CU634019.7-201ENST00000624153 1185 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 FP236241.2-201ENST00000624906 1185 ntBASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM7Q9NR12 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 AC005229.1-201ENST00000392885 409 ntBASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 TDH-203ENST00000531764 1110 ntBASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 HTR7P1-202ENST00000624664 4411 ntBASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM7Q9NR12 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 PCDH8P1-201ENST00000428983 2773 ntBASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 AP001282.1-201ENST00000531301 1499 ntBASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 PCDHB19P-201ENST00000570871 2371 ntBASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 AL442647.2-201ENST00000429864 857 ntBASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 MIR3615-201ENST00000581999 87 ntBASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 CYP2T1P-202ENST00000641596 2535 ntBASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM7Q9NR12 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms