Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRM3Q9HC36 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.05■□□□□ 0.16
MRM3Q9HC36 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AC105250.1-201ENST00000509378 2057 ntBASIC16.04■□□□□ 0.16
MRM3Q9HC36 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AC211486.1-202ENST00000416371 468 ntBASIC16.04■□□□□ 0.16
MRM3Q9HC36 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AP006288.1-201ENST00000446065 395 ntBASIC16.04■□□□□ 0.16
MRM3Q9HC36 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AC211476.1-201ENST00000503899 468 ntBASIC16.04■□□□□ 0.16
MRM3Q9HC36 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AC134684.3-201ENST00000641758 218 ntBASIC16.04■□□□□ 0.16
MRM3Q9HC36 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.04■□□□□ 0.16
MRM3Q9HC36 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 AC006058.4-201ENST00000624016 1670 ntBASIC16.04■□□□□ 0.16
MRM3Q9HC36 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.04■□□□□ 0.16
MRM3Q9HC36 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRM3Q9HC36 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 PPT1-215ENST00000641471 2368 ntBASIC16.03■□□□□ 0.16
MRM3Q9HC36 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 PHKG1P2-201ENST00000457537 863 ntBASIC16.03■□□□□ 0.16
MRM3Q9HC36 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 ALG1L8P-201ENST00000533887 760 ntBASIC16.03■□□□□ 0.16
MRM3Q9HC36 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.03■□□□□ 0.16
MRM3Q9HC36 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 CICP13-201ENST00000422015 2789 ntBASIC16.03■□□□□ 0.16
MRM3Q9HC36 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRM3Q9HC36 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.03■□□□□ 0.16
MRM3Q9HC36 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRM3Q9HC36 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRM3Q9HC36 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MRM3Q9HC36 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MRM3Q9HC36 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MRM3Q9HC36 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRM3Q9HC36 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.02■□□□□ 0.16
MRM3Q9HC36 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.02■□□□□ 0.16
MRM3Q9HC36 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MRM3Q9HC36 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRM3Q9HC36 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms