Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2OQ9C0C9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AP001094.4-201ENST00000579008 2176 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 MIR326-201ENST00000362220 95 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 LDHBP1-201ENST00000455730 1119 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 ACTG1P17-201ENST00000558391 1119 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 MIR4722-201ENST00000578292 60 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AC061975.2-201ENST00000581722 295 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AC025048.3-201ENST00000590609 569 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AC005702.4-201ENST00000618393 416 ntBASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2OQ9C0C9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.64■□□□□ 0.42
UBE2OQ9C0C9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
UBE2OQ9C0C9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.64■□□□□ 0.42
UBE2OQ9C0C9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.64■□□□□ 0.42
UBE2OQ9C0C9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
UBE2OQ9C0C9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBE2OQ9C0C9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.64■□□□□ 0.42
UBE2OQ9C0C9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 AC026954.1-201ENST00000429771 1293 ntBASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 AC253536.4-201ENST00000440539 267 ntBASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 AC104306.2-201ENST00000451877 341 ntBASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 FTH1P14-201ENST00000482930 551 ntBASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
UBE2OQ9C0C9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2OQ9C0C9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2OQ9C0C9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2OQ9C0C9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2OQ9C0C9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms