Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 RBM17P3-201ENST00000417687 1192 ntBASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 AC132008.2-207ENST00000454517 770 ntBASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 AL773604.1-201ENST00000617417 272 ntBASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 AC097376.2-205ENST00000610159 5334 ntBASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 TCAF1P1-201ENST00000414990 2232 ntBASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 AC046185.3-201ENST00000623228 1824 ntBASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NDUFAF3Q9BU61 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 AP005117.1-202ENST00000581724 1908 ntBASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 REXO1L1P-202ENST00000608646 1974 ntBASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 AC006504.5-208ENST00000588784 2401 ntBASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.52□□□□□ -0.4
NDUFAF3Q9BU61 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AC093525.9-201ENST00000624961 1746 ntBASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AC010491.1-201ENST00000563101 2797 ntBASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 RCN1P2-201ENST00000398357 915 ntBASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 FAM197Y8-203ENST00000450145 560 ntBASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AC073648.2-201ENST00000510116 352 ntBASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AF238378.1-201ENST00000526806 358 ntBASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AC005336.2-201ENST00000593183 939 ntBASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms