Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.27□□□□□ -0.12
VRK1Q99986 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VRK1Q99986 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.27□□□□□ -0.12
VRK1Q99986 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.27□□□□□ -0.12
VRK1Q99986 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 SLC22A20-204ENST00000530038 1673 ntBASIC14.27□□□□□ -0.12
VRK1Q99986 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VRK1Q99986 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.27□□□□□ -0.12
VRK1Q99986 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
VRK1Q99986 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 AKAP8P1-201ENST00000434743 1349 ntBASIC14.27□□□□□ -0.12
VRK1Q99986 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK1Q99986 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VRK1Q99986 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VRK1Q99986 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.27□□□□□ -0.13
VRK1Q99986 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VRK1Q99986 KRT18P32-201ENST00000424695 1287 ntBASIC14.27□□□□□ -0.13
VRK1Q99986 HMGN1P19-201ENST00000436976 333 ntBASIC14.27□□□□□ -0.13
VRK1Q99986 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.27□□□□□ -0.13
VRK1Q99986 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK1Q99986 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK1Q99986 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 CYMP-203ENST00000474680 1263 ntBASIC14.27□□□□□ -0.13
VRK1Q99986 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.27□□□□□ -0.13
VRK1Q99986 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.27□□□□□ -0.13
VRK1Q99986 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
VRK1Q99986 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.27□□□□□ -0.13
VRK1Q99986 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.27□□□□□ -0.13
VRK1Q99986 AL031055.1-201ENST00000606362 631 ntBASIC14.27□□□□□ -0.13
VRK1Q99986 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.27□□□□□ -0.13
VRK1Q99986 LINC00628-201ENST00000628516 1289 ntBASIC14.27□□□□□ -0.13
VRK1Q99986 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
VRK1Q99986 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
VRK1Q99986 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.27□□□□□ -0.13
VRK1Q99986 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VRK1Q99986 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.27□□□□□ -0.13
VRK1Q99986 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK1Q99986 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK1Q99986 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 UXT-AS1-201ENST00000590504 1525 ntBASIC14.26□□□□□ -0.13
VRK1Q99986 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VRK1Q99986 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.26□□□□□ -0.13
VRK1Q99986 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 ADH5P3-201ENST00000433842 1137 ntBASIC14.26□□□□□ -0.13
VRK1Q99986 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.26□□□□□ -0.13
VRK1Q99986 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK1Q99986 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.26□□□□□ -0.13
VRK1Q99986 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.26□□□□□ -0.13
VRK1Q99986 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 MPDU1-223ENST00000582151 728 ntBASIC14.26□□□□□ -0.13
VRK1Q99986 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.26□□□□□ -0.13
VRK1Q99986 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK1Q99986 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VRK1Q99986 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK1Q99986 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VRK1Q99986 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms