Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CICP6-201ENST00000457191 2729 ntBASIC15.28■□□□□ 0.04
BBS4Q96RK4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 DNAJB3-201ENST00000446806 729 ntBASIC15.28■□□□□ 0.04
BBS4Q96RK4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS4Q96RK4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
BBS4Q96RK4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.27■□□□□ 0.04
BBS4Q96RK4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BBS4Q96RK4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 AC079140.1-201ENST00000508039 487 ntBASIC15.27■□□□□ 0.04
BBS4Q96RK4 KRT8P48-201ENST00000515599 1220 ntBASIC15.27■□□□□ 0.04
BBS4Q96RK4 RNA5SP410-201ENST00000516285 106 ntBASIC15.27■□□□□ 0.04
BBS4Q96RK4 AC243562.1-201ENST00000560672 389 ntBASIC15.27■□□□□ 0.04
BBS4Q96RK4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 AL671883.3-201ENST00000603274 991 ntBASIC15.27■□□□□ 0.04
BBS4Q96RK4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BBS4Q96RK4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.27■□□□□ 0.03
BBS4Q96RK4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
BBS4Q96RK4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BBS4Q96RK4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BBS4Q96RK4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
BBS4Q96RK4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.27■□□□□ 0.03
BBS4Q96RK4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BBS4Q96RK4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BBS4Q96RK4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms