Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AC234782.1-201ENST00000451950 919 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AC116345.2-201ENST00000512837 523 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AC013355.1-201ENST00000562625 723 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MIR4683-201ENST00000579659 81 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MEG3_2.1-201ENST00000611456 105 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AL805961.1-203ENST00000641078 1258 ntBASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ALMS1Q8TCU4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AC125604.1-201ENST00000496255 707 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 BNIP3P13-201ENST00000599968 566 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AC004923.1-202ENST00000642106 209 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 HLA-A-202ENST00000376806 1854 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AC103988.2-201ENST00000561804 725 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AC091544.8-201ENST00000619490 361 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AC099398.1-201ENST00000567919 2776 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 AC005357.2-202ENST00000590507 1060 ntBASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC10.55□□□□□ -0.72
ALMS1Q8TCU4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 AL138799.1-201ENST00000448213 1675 ntBASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 LINC01144-201ENST00000626198 1710 ntBASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 AC148477.4-201ENST00000613430 1793 ntBASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
ALMS1Q8TCU4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms