Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 AL096865.1-201ENST00000606796 927 ntBASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 RN7SL828P-201ENST00000607615 303 ntBASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
FNDC9Q8TBE3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 REXO1L8P-201ENST00000604378 1897 ntBASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 INGX-202ENST00000489074 768 ntBASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 AL365330.1-201ENST00000607459 531 ntBASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 AL589739.1-201ENST00000607720 493 ntBASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 AL138828.2-201ENST00000615812 383 ntBASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
FNDC9Q8TBE3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AL592424.1-201ENST00000563624 1536 ntBASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 FAM8A3P-201ENST00000427218 844 ntBASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 HLA-V-204ENST00000476601 1289 ntBASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 MIR4321-201ENST00000592276 80 ntBASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 AC026979.3-201ENST00000607315 403 ntBASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FNDC9Q8TBE3 CETN4P-206ENST00000642099 2168 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms