Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 CALR4P-201ENST00000431943 946 ntBASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 AP001258.2-201ENST00000529891 490 ntBASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 RHOQP1-201ENST00000555758 579 ntBASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 AL138709.1-201ENST00000614840 1693 ntBASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHDC9Q8NEP7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AL133267.1-201ENST00000398220 340 ntBASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AL591846.1-201ENST00000451736 433 ntBASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AC104306.2-201ENST00000451877 341 ntBASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 AC132938.4-201ENST00000623835 848 ntBASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 ME2P1-201ENST00000426028 1970 ntBASIC17.46■□□□□ 0.39
KLHDC9Q8NEP7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
KLHDC9Q8NEP7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 AC005052.1-201ENST00000625181 2492 ntBASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 Z93015.1-201ENST00000451718 390 ntBASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 AC145423.3-201ENST00000615987 467 ntBASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KLHDC9Q8NEP7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KLHDC9Q8NEP7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
KLHDC9Q8NEP7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.44■□□□□ 0.38
KLHDC9Q8NEP7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KLHDC9Q8NEP7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms