Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 AC098859.1-201ENST00000502915 1238 ntBASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 RN7SL828P-201ENST00000607615 303 ntBASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 AL139011.1-202ENST00000642063 584 ntBASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 GGT4P-201ENST00000623672 1708 ntBASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 FOXO1B-201ENST00000504678 1527 ntBASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC155Q8N6L0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 RNA5SP410-201ENST00000516285 106 ntBASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 AC140912.1-201ENST00000577171 1054 ntBASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 GGT3P-204ENST00000453783 1664 ntBASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CCDC155Q8N6L0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC155Q8N6L0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.21■□□□□ 0.5
CCDC155Q8N6L0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC155Q8N6L0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 AC073439.1-201ENST00000624121 1774 ntBASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 AL353779.1-201ENST00000434793 351 ntBASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 TP53TG3HP-202ENST00000569755 579 ntBASIC18.2■□□□□ 0.5
CCDC155Q8N6L0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms