Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.07■□□□□ 0
DEPDC4Q8N2C3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 RNA5SP415-201ENST00000517246 115 ntBASIC15.06■□□□□ 0
DEPDC4Q8N2C3 IGHV3-22-201ENST00000520721 359 ntBASIC15.06■□□□□ 0
DEPDC4Q8N2C3 SLC25A1P1-201ENST00000528351 927 ntBASIC15.06■□□□□ 0
DEPDC4Q8N2C3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 AC145285.3-201ENST00000564603 959 ntBASIC15.06■□□□□ 0
DEPDC4Q8N2C3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 AC027601.4-201ENST00000611259 610 ntBASIC15.06■□□□□ 0
DEPDC4Q8N2C3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 PMS2P7-201ENST00000506558 1336 ntBASIC15.06■□□□□ 0
DEPDC4Q8N2C3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
DEPDC4Q8N2C3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 AC097376.2-205ENST00000610159 5334 ntBASIC15.05■□□□□ 0
DEPDC4Q8N2C3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
DEPDC4Q8N2C3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 HNRNPA1P23-201ENST00000491091 1133 ntBASIC15.05■□□□□ -0
DEPDC4Q8N2C3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 AC012640.2-201ENST00000561606 901 ntBASIC15.05■□□□□ -0
DEPDC4Q8N2C3 AC091167.2-201ENST00000579581 588 ntBASIC15.05■□□□□ -0
DEPDC4Q8N2C3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 AL353135.1-201ENST00000606729 504 ntBASIC15.05■□□□□ -0
DEPDC4Q8N2C3 AC020765.3-201ENST00000613051 740 ntBASIC15.05■□□□□ -0
DEPDC4Q8N2C3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.05■□□□□ -0
DEPDC4Q8N2C3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.05■□□□□ -0
DEPDC4Q8N2C3 MYO15B-237ENST00000642007 4893 ntBASIC15.05■□□□□ -0
DEPDC4Q8N2C3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms