Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.58□□□□□ -0.07
SHFQ7M4L6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHFQ7M4L6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHFQ7M4L6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.58□□□□□ -0.07
SHFQ7M4L6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHFQ7M4L6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SHFQ7M4L6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHFQ7M4L6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 U82695.1-201ENST00000635752 1889 ntBASIC14.58□□□□□ -0.08
SHFQ7M4L6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHFQ7M4L6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.58□□□□□ -0.08
SHFQ7M4L6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHFQ7M4L6 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 KRT18P67-201ENST00000432816 1264 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 FAM185BP-201ENST00000443595 716 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 AC018712.1-201ENST00000455767 687 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 AC108073.2-201ENST00000464002 357 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 AL121912.1-201ENST00000603683 238 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 AC012313.10-201ENST00000623509 926 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 TP73-AS1-207ENST00000624167 988 ntBASIC14.57□□□□□ -0.08
SHFQ7M4L6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
SHFQ7M4L6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms