Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RCN1P2-201ENST00000398357 915 ntBASIC14.12□□□□□ -0.15
C11orf88Q6PI97 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AL031284.1-201ENST00000419297 478 ntBASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AL590627.1-203ENST00000421194 1026 ntBASIC14.12□□□□□ -0.15
C11orf88Q6PI97 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AC120114.3-201ENST00000611923 658 ntBASIC14.12□□□□□ -0.15
C11orf88Q6PI97 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.12□□□□□ -0.15
C11orf88Q6PI97 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 INTS4P1-201ENST00000438455 1935 ntBASIC14.11□□□□□ -0.15
C11orf88Q6PI97 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 AC023157.3-201ENST00000619086 2088 ntBASIC14.11□□□□□ -0.15
C11orf88Q6PI97 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.11□□□□□ -0.15
C11orf88Q6PI97 AC002310.6-201ENST00000624451 1377 ntBASIC14.11□□□□□ -0.15
C11orf88Q6PI97 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 FAM220CP-201ENST00000395253 831 ntBASIC14.11□□□□□ -0.15
C11orf88Q6PI97 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 AL731571.1-201ENST00000617058 5428 ntBASIC14.11□□□□□ -0.15
C11orf88Q6PI97 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
C11orf88Q6PI97 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms