Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 AC027369.6-201ENST00000525520 931 ntBASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 SPCS2P1-201ENST00000561636 679 ntBASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 AL158211.3-201ENST00000607385 239 ntBASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.77■□□□□ 0.27
RFWD3Q6PCD5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 BCRP1-201ENST00000444246 691 ntBASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AL138828.2-201ENST00000615812 383 ntBASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AC073592.8-201ENST00000624126 511 ntBASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD3Q6PCD5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 BASP1P1-201ENST00000430708 665 ntBASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AL096865.1-201ENST00000606796 927 ntBASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AL133215.2-201ENST00000609242 977 ntBASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.75■□□□□ 0.27
RFWD3Q6PCD5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms