Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SWSAP1Q6NVH7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 SLC7A15P-201ENST00000424028 1363 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AL391825.1-201ENST00000457671 1364 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AC018892.3-201ENST00000623986 2499 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AC087499.6-201ENST00000411576 835 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AC074338.1-201ENST00000416825 156 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AL596325.1-201ENST00000563991 1082 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AC140912.1-201ENST00000577171 1054 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AL450472.2-201ENST00000603663 1156 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 AC012645.4-201ENST00000610691 1061 ntBASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SWSAP1Q6NVH7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 AC005034.1-201ENST00000426657 489 ntBASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 RN7SL692P-201ENST00000464677 288 ntBASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 MEIS3P1-201ENST00000495167 958 ntBASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.79■□□□□ 0.44
SWSAP1Q6NVH7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms