Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 DNAJB3-202ENST00000449667 1266 ntBASIC14.15□□□□□ -0.14
HIST3H3Q16695 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 SNHG9-202ENST00000564014 471 ntBASIC14.15□□□□□ -0.14
HIST3H3Q16695 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H3Q16695 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H3Q16695 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST3H3Q16695 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.15□□□□□ -0.15
HIST3H3Q16695 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 AC018892.3-201ENST00000623986 2499 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 SPDYE7P-202ENST00000420373 878 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 PHKG1P2-201ENST00000457537 863 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 MIR4313-201ENST00000580760 101 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 AL450472.2-201ENST00000603663 1156 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 RN7SL828P-201ENST00000607615 303 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 AL162727.3-201ENST00000635661 2787 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST3H3Q16695 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H3Q16695 CICP6-201ENST00000457191 2729 ntBASIC14.14□□□□□ -0.15
HIST3H3Q16695 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 AC132872.4-202ENST00000622924 2756 ntBASIC14.13□□□□□ -0.15
HIST3H3Q16695 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.13□□□□□ -0.15
HIST3H3Q16695 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 MIR1233-2-201ENST00000408138 82 ntBASIC14.13□□□□□ -0.15
HIST3H3Q16695 MIR1233-1-201ENST00000408722 82 ntBASIC14.13□□□□□ -0.15
HIST3H3Q16695 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST3H3Q16695 MIR4453-201ENST00000584019 89 ntBASIC14.13□□□□□ -0.15
HIST3H3Q16695 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 AC003101.2-201ENST00000612557 442 ntBASIC14.13□□□□□ -0.15
HIST3H3Q16695 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST3H3Q16695 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms