Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 ATP5G2P4-201ENST00000442175 420 ntBASIC21.66■■□□□ 1.06
CGNL1Q0VF96 WASH4P-201ENST00000564273 1246 ntBASIC21.66■■□□□ 1.06
CGNL1Q0VF96 RRP7BP-205ENST00000566851 833 ntBASIC21.66■■□□□ 1.06
CGNL1Q0VF96 AC097359.3-201ENST00000603982 1210 ntBASIC21.66■■□□□ 1.06
CGNL1Q0VF96 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 AC007431.3-201ENST00000623221 587 ntBASIC21.66■■□□□ 1.06
CGNL1Q0VF96 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.66■■□□□ 1.06
CGNL1Q0VF96 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 AC008494.3-201ENST00000606615 944 ntBASIC21.65■■□□□ 1.06
CGNL1Q0VF96 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 AC069224.1-201ENST00000566372 1715 ntBASIC21.65■■□□□ 1.06
CGNL1Q0VF96 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.65■■□□□ 1.06
CGNL1Q0VF96 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 PCDH8P1-201ENST00000428983 2773 ntBASIC21.65■■□□□ 1.06
CGNL1Q0VF96 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CGNL1Q0VF96 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.64■■□□□ 1.06
CGNL1Q0VF96 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CGNL1Q0VF96 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 GPR53P-205ENST00000457298 1084 ntBASIC21.64■■□□□ 1.05
CGNL1Q0VF96 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 RARRES2P5-201ENST00000564013 466 ntBASIC21.64■■□□□ 1.05
CGNL1Q0VF96 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 AC018892.3-201ENST00000623986 2499 ntBASIC21.64■■□□□ 1.05
CGNL1Q0VF96 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 CYP2T1P-202ENST00000641596 2535 ntBASIC21.64■■□□□ 1.05
CGNL1Q0VF96 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CGNL1Q0VF96 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CGNL1Q0VF96 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CGNL1Q0VF96 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.63■■□□□ 1.05
CGNL1Q0VF96 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CGNL1Q0VF96 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.63■■□□□ 1.05
CGNL1Q0VF96 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CGNL1Q0VF96 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms