Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 MIR4649-201ENST00000582839 64 ntBASIC21.06■□□□□ 0.96
COL16A1Q07092 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.06■□□□□ 0.96
COL16A1Q07092 GPR39-203ENST00000622084 900 ntTSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COL16A1Q07092 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL16A1Q07092 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL16A1Q07092 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL16A1Q07092 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COL16A1Q07092 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC21.05■□□□□ 0.96
COL16A1Q07092 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.05■□□□□ 0.96
COL16A1Q07092 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.05■□□□□ 0.96
COL16A1Q07092 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC21.05■□□□□ 0.96
COL16A1Q07092 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC21.05■□□□□ 0.96
COL16A1Q07092 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC21.05■□□□□ 0.96
COL16A1Q07092 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL16A1Q07092 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.05■□□□□ 0.96
COL16A1Q07092 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.04■□□□□ 0.96
COL16A1Q07092 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.04■□□□□ 0.96
COL16A1Q07092 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.04■□□□□ 0.96
COL16A1Q07092 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC21.04■□□□□ 0.96
COL16A1Q07092 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 DNM1P30-201ENST00000563586 452 ntBASIC21.04■□□□□ 0.96
COL16A1Q07092 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.04■□□□□ 0.96
COL16A1Q07092 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.04■□□□□ 0.96
COL16A1Q07092 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.04■□□□□ 0.96
COL16A1Q07092 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.04■□□□□ 0.96
COL16A1Q07092 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
COL16A1Q07092 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COL16A1Q07092 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.04■□□□□ 0.96
COL16A1Q07092 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.04■□□□□ 0.96
COL16A1Q07092 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.04■□□□□ 0.96
COL16A1Q07092 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL16A1Q07092 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL16A1Q07092 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.04■□□□□ 0.96
COL16A1Q07092 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COL16A1Q07092 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.04■□□□□ 0.96
COL16A1Q07092 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.04■□□□□ 0.96
COL16A1Q07092 RPL17P45-201ENST00000586289 509 ntBASIC21.04■□□□□ 0.96
COL16A1Q07092 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.03■□□□□ 0.96
COL16A1Q07092 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.03■□□□□ 0.96
COL16A1Q07092 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL16A1Q07092 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL16A1Q07092 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC21.03■□□□□ 0.96
COL16A1Q07092 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL16A1Q07092 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.03■□□□□ 0.96
COL16A1Q07092 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL16A1Q07092 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL16A1Q07092 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC21.03■□□□□ 0.96
COL16A1Q07092 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC21.03■□□□□ 0.96
COL16A1Q07092 AC114812.1-204ENST00000449669 728 ntBASIC21.03■□□□□ 0.96
COL16A1Q07092 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC21.03■□□□□ 0.96
COL16A1Q07092 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC21.03■□□□□ 0.96
COL16A1Q07092 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC21.03■□□□□ 0.96
COL16A1Q07092 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC21.03■□□□□ 0.96
COL16A1Q07092 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21.03■□□□□ 0.96
COL16A1Q07092 AC090164.2-201ENST00000611487 516 ntBASIC21.03■□□□□ 0.96
COL16A1Q07092 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL16A1Q07092 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC21.03■□□□□ 0.96
COL16A1Q07092 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL16A1Q07092 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL16A1Q07092 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL16A1Q07092 PCDHB18P-201ENST00000524813 2368 ntBASIC21.02■□□□□ 0.96
COL16A1Q07092 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL16A1Q07092 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL16A1Q07092 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL16A1Q07092 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC21.02■□□□□ 0.96
COL16A1Q07092 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL16A1Q07092 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.02■□□□□ 0.96
COL16A1Q07092 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.02■□□□□ 0.96
COL16A1Q07092 AC005324.6-201ENST00000587972 613 ntBASIC21.02■□□□□ 0.96
COL16A1Q07092 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms