Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.71■□□□□ 0.59
GABPAQ06546 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GABPAQ06546 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABPAQ06546 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABPAQ06546 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABPAQ06546 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.71■□□□□ 0.58
GABPAQ06546 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
GABPAQ06546 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
GABPAQ06546 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.7■□□□□ 0.58
GABPAQ06546 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.7■□□□□ 0.58
GABPAQ06546 AC244107.1-201ENST00000442033 332 ntBASIC18.7■□□□□ 0.58
GABPAQ06546 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.7■□□□□ 0.58
GABPAQ06546 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.7■□□□□ 0.58
GABPAQ06546 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.7■□□□□ 0.58
GABPAQ06546 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
GABPAQ06546 CROCCP1-201ENST00000426910 5675 ntBASIC18.7■□□□□ 0.58
GABPAQ06546 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.7■□□□□ 0.58
GABPAQ06546 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.7■□□□□ 0.58
GABPAQ06546 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GABPAQ06546 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABPAQ06546 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
GABPAQ06546 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.69■□□□□ 0.58
GABPAQ06546 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.69■□□□□ 0.58
GABPAQ06546 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GABPAQ06546 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GABPAQ06546 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 ARSEP1-201ENST00000420443 635 ntBASIC18.69■□□□□ 0.58
GABPAQ06546 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.69■□□□□ 0.58
GABPAQ06546 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GABPAQ06546 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.69■□□□□ 0.58
GABPAQ06546 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.69■□□□□ 0.58
GABPAQ06546 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 AC036164.1-201ENST00000570544 333 ntBASIC18.69■□□□□ 0.58
GABPAQ06546 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GABPAQ06546 BRI3BPP1-201ENST00000594224 787 ntBASIC18.69■□□□□ 0.58
GABPAQ06546 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.69■□□□□ 0.58
GABPAQ06546 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.69■□□□□ 0.58
GABPAQ06546 AL662844.4-201ENST00000606367 2838 ntBASIC18.69■□□□□ 0.58
GABPAQ06546 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
GABPAQ06546 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GABPAQ06546 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GABPAQ06546 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.69■□□□□ 0.58
GABPAQ06546 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABPAQ06546 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GABPAQ06546 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.68■□□□□ 0.58
GABPAQ06546 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABPAQ06546 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GABPAQ06546 AL442647.2-201ENST00000429864 857 ntBASIC18.68■□□□□ 0.58
GABPAQ06546 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms