Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AC023274.1-201ENST00000418278 595 ntBASIC15.51■□□□□ 0.07
HMGCS1Q01581 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 POLD2P1-201ENST00000511220 997 ntBASIC15.51■□□□□ 0.07
HMGCS1Q01581 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AC091812.2-201ENST00000619081 385 ntBASIC15.51■□□□□ 0.07
HMGCS1Q01581 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 FOXO1B-201ENST00000504678 1527 ntBASIC15.51■□□□□ 0.07
HMGCS1Q01581 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCS1Q01581 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 SSR4P1-203ENST00000599569 2260 ntBASIC15.5■□□□□ 0.07
HMGCS1Q01581 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 AC073389.1-201ENST00000595595 795 ntBASIC15.5■□□□□ 0.07
HMGCS1Q01581 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 NFIC-211ENST00000641145 8399 ntBASIC15.5■□□□□ 0.07
HMGCS1Q01581 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.5■□□□□ 0.07
HMGCS1Q01581 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGCS1Q01581 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 AP001282.1-201ENST00000531301 1499 ntBASIC15.49■□□□□ 0.07
HMGCS1Q01581 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 AL355306.1-201ENST00000415580 579 ntBASIC15.49■□□□□ 0.07
HMGCS1Q01581 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 AL671277.1-201ENST00000429656 993 ntBASIC15.49■□□□□ 0.07
HMGCS1Q01581 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGCS1Q01581 AL135744.1-201ENST00000565098 629 ntBASIC15.49■□□□□ 0.07
HMGCS1Q01581 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGCS1Q01581 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms