Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ABCA4P78363 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ABCA4P78363 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA4P78363 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCA4P78363 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA4P78363 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.8□□□□□ -0.2
ABCA4P78363 AC099548.2-209ENST00000480264 625 ntBASIC13.8□□□□□ -0.2
ABCA4P78363 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA4P78363 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA4P78363 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA4P78363 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
ABCA4P78363 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA4P78363 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 BOLA2P3-201ENST00000404566 256 ntBASIC13.79□□□□□ -0.2
ABCA4P78363 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.79□□□□□ -0.2
ABCA4P78363 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.79□□□□□ -0.2
ABCA4P78363 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 CLK3P2-201ENST00000427566 1453 ntBASIC13.79□□□□□ -0.2
ABCA4P78363 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
ABCA4P78363 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 AC005915.1-201ENST00000624912 2018 ntBASIC13.79□□□□□ -0.2
ABCA4P78363 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ABCA4P78363 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ABCA4P78363 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.79□□□□□ -0.2
ABCA4P78363 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ABCA4P78363 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.79□□□□□ -0.2
ABCA4P78363 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ABCA4P78363 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.79□□□□□ -0.2
ABCA4P78363 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ABCA4P78363 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA4P78363 Z97205.2-201ENST00000564697 1639 ntBASIC13.79□□□□□ -0.2
ABCA4P78363 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 PCDH8P1-201ENST00000428983 2773 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA4P78363 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 BRWD1P1-201ENST00000401091 371 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA4P78363 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.78□□□□□ -0.2
ABCA4P78363 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 SLC25A47P1-201ENST00000531577 414 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 TIMM17BP1-201ENST00000545713 516 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.78□□□□□ -0.2
ABCA4P78363 AC036164.1-201ENST00000570544 333 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA4P78363 MIR4321-201ENST00000592276 80 ntBASIC13.78□□□□□ -0.2
ABCA4P78363 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms