Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PCDHA12-202ENST00000613593 2588 ntBASIC19.62■□□□□ 0.73
NUP98P52948 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.62■□□□□ 0.73
NUP98P52948 AD000864.1-201ENST00000624076 2295 ntBASIC19.62■□□□□ 0.73
NUP98P52948 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 AC011477.6-201ENST00000604980 1927 ntBASIC19.62■□□□□ 0.73
NUP98P52948 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.62■□□□□ 0.73
NUP98P52948 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.62■□□□□ 0.73
NUP98P52948 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.62■□□□□ 0.73
NUP98P52948 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.62■□□□□ 0.73
NUP98P52948 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NUP98P52948 AC078819.1-201ENST00000547454 765 ntBASIC19.62■□□□□ 0.73
NUP98P52948 AC012085.1-201ENST00000548270 765 ntBASIC19.62■□□□□ 0.73
NUP98P52948 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.62■□□□□ 0.73
NUP98P52948 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
NUP98P52948 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NUP98P52948 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.62■□□□□ 0.73
NUP98P52948 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.62■□□□□ 0.73
NUP98P52948 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.62■□□□□ 0.73
NUP98P52948 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP98P52948 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.61■□□□□ 0.73
NUP98P52948 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.61■□□□□ 0.73
NUP98P52948 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NUP98P52948 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.61■□□□□ 0.73
NUP98P52948 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NUP98P52948 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.61■□□□□ 0.73
NUP98P52948 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NUP98P52948 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.61■□□□□ 0.73
NUP98P52948 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.61■□□□□ 0.73
NUP98P52948 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.61■□□□□ 0.73
NUP98P52948 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NUP98P52948 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NUP98P52948 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.61■□□□□ 0.73
NUP98P52948 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.61■□□□□ 0.73
NUP98P52948 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP98P52948 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.61■□□□□ 0.73
NUP98P52948 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NUP98P52948 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.61■□□□□ 0.73
NUP98P52948 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.6■□□□□ 0.73
NUP98P52948 YBX1P6-201ENST00000442962 1002 ntBASIC19.6■□□□□ 0.73
NUP98P52948 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.6■□□□□ 0.73
NUP98P52948 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.6■□□□□ 0.73
NUP98P52948 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.6■□□□□ 0.73
NUP98P52948 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.6■□□□□ 0.73
NUP98P52948 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 AC244093.1-201ENST00000610837 814 ntBASIC19.6■□□□□ 0.73
NUP98P52948 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.6■□□□□ 0.73
NUP98P52948 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.6■□□□□ 0.73
NUP98P52948 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.6■□□□□ 0.73
NUP98P52948 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NUP98P52948 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.6■□□□□ 0.73
NUP98P52948 FAM86HP-204ENST00000513466 959 ntBASIC19.6■□□□□ 0.73
NUP98P52948 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.6■□□□□ 0.73
NUP98P52948 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.6■□□□□ 0.73
NUP98P52948 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP98P52948 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.6■□□□□ 0.73
NUP98P52948 AC009486.1-201ENST00000569860 813 ntBASIC19.6■□□□□ 0.73
NUP98P52948 AC145423.3-201ENST00000615987 467 ntBASIC19.6■□□□□ 0.73
NUP98P52948 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.6■□□□□ 0.73
NUP98P52948 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NUP98P52948 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.59■□□□□ 0.73
NUP98P52948 AL138709.1-201ENST00000614840 1693 ntBASIC19.59■□□□□ 0.73
NUP98P52948 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.59■□□□□ 0.73
NUP98P52948 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.59■□□□□ 0.73
NUP98P52948 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.59■□□□□ 0.73
NUP98P52948 AC006033.1-201ENST00000440505 426 ntBASIC19.59■□□□□ 0.73
NUP98P52948 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP98P52948 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms