Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
MRE11P49959 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MRE11P49959 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.82■□□□□ 0.6
MRE11P49959 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MRE11P49959 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
MRE11P49959 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 IGHV3-47-201ENST00000425060 335 ntBASIC18.82■□□□□ 0.6
MRE11P49959 HLA-F-220ENST00000434407 884 ntBASIC18.82■□□□□ 0.6
MRE11P49959 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 AC018712.1-201ENST00000455767 687 ntBASIC18.82■□□□□ 0.6
MRE11P49959 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.82■□□□□ 0.6
MRE11P49959 STK19B-204ENST00000512515 211 ntBASIC18.82■□□□□ 0.6
MRE11P49959 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.82■□□□□ 0.6
MRE11P49959 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.82■□□□□ 0.6
MRE11P49959 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.82■□□□□ 0.6
MRE11P49959 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.82■□□□□ 0.6
MRE11P49959 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.82■□□□□ 0.6
MRE11P49959 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.82■□□□□ 0.6
MRE11P49959 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.82■□□□□ 0.6
MRE11P49959 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.82■□□□□ 0.6
MRE11P49959 AL355877.3-201ENST00000622820 899 ntBASIC18.82■□□□□ 0.6
MRE11P49959 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.82■□□□□ 0.6
MRE11P49959 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.82■□□□□ 0.6
MRE11P49959 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MRE11P49959 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRE11P49959 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.81■□□□□ 0.6
MRE11P49959 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.81■□□□□ 0.6
MRE11P49959 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MRE11P49959 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MRE11P49959 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.81■□□□□ 0.6
MRE11P49959 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MRE11P49959 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MRE11P49959 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
MRE11P49959 AC211486.1-202ENST00000416371 468 ntBASIC18.81■□□□□ 0.6
MRE11P49959 AL645939.2-201ENST00000427340 991 ntBASIC18.81■□□□□ 0.6
MRE11P49959 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.81■□□□□ 0.6
MRE11P49959 AC211476.1-201ENST00000503899 468 ntBASIC18.81■□□□□ 0.6
MRE11P49959 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.81■□□□□ 0.6
MRE11P49959 AC040169.1-201ENST00000565382 521 ntBASIC18.81■□□□□ 0.6
MRE11P49959 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
MRE11P49959 IGHV3-41-201ENST00000613121 348 ntBASIC18.81■□□□□ 0.6
MRE11P49959 AC079602.3-201ENST00000623931 403 ntBASIC18.81■□□□□ 0.6
MRE11P49959 FAM215A-202ENST00000632077 792 ntBASIC18.81■□□□□ 0.6
MRE11P49959 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MRE11P49959 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MRE11P49959 AL137784.3-201ENST00000623858 2288 ntBASIC18.81■□□□□ 0.6
MRE11P49959 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 AP003680.1-201ENST00000598970 3660 ntBASIC18.81■□□□□ 0.6
MRE11P49959 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MRE11P49959 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.81■□□□□ 0.6
MRE11P49959 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MRE11P49959 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 C8orf49-201ENST00000525043 1968 ntBASIC18.81■□□□□ 0.6
MRE11P49959 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRE11P49959 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRE11P49959 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRE11P49959 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MRE11P49959 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRE11P49959 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MRE11P49959 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRE11P49959 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MRE11P49959 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRE11P49959 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRE11P49959 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
MRE11P49959 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.8■□□□□ 0.6
MRE11P49959 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.8■□□□□ 0.6
MRE11P49959 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.8■□□□□ 0.6
MRE11P49959 AP006288.1-201ENST00000446065 395 ntBASIC18.8■□□□□ 0.6
MRE11P49959 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
MRE11P49959 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRE11P49959 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.8■□□□□ 0.6
MRE11P49959 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.8■□□□□ 0.6
MRE11P49959 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms