Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.3■□□□□ 0.2
HADHAP40939 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.3■□□□□ 0.2
HADHAP40939 AC024267.1-201ENST00000582320 895 ntBASIC16.3■□□□□ 0.2
HADHAP40939 MIR4469-201ENST00000583919 79 ntBASIC16.3■□□□□ 0.2
HADHAP40939 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.3■□□□□ 0.2
HADHAP40939 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 AC010327.4-202ENST00000591484 748 ntBASIC16.3■□□□□ 0.2
HADHAP40939 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.3■□□□□ 0.2
HADHAP40939 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HADHAP40939 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.3■□□□□ 0.2
HADHAP40939 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
HADHAP40939 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HADHAP40939 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.29■□□□□ 0.2
HADHAP40939 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 AC067930.6-201ENST00000623257 4947 ntBASIC16.29■□□□□ 0.2
HADHAP40939 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HADHAP40939 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 AC112482.1-201ENST00000492080 688 ntBASIC16.29■□□□□ 0.2
HADHAP40939 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HADHAP40939 AC079781.4-201ENST00000641908 219 ntBASIC16.29■□□□□ 0.2
HADHAP40939 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 AC092384.3-202ENST00000564646 2873 ntBASIC16.29■□□□□ 0.2
HADHAP40939 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
HADHAP40939 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 AC008677.1-201ENST00000519230 1561 ntBASIC16.29■□□□□ 0.2
HADHAP40939 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.29■□□□□ 0.2
HADHAP40939 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 AC126177.1-201ENST00000547829 2218 ntBASIC16.29■□□□□ 0.2
HADHAP40939 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHAP40939 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHAP40939 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHAP40939 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HADHAP40939 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HADHAP40939 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HADHAP40939 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 MIR346-201ENST00000362234 95 ntBASIC16.28■□□□□ 0.2
HADHAP40939 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHAP40939 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
HADHAP40939 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
HADHAP40939 AC142381.1-201ENST00000426099 345 ntBASIC16.28■□□□□ 0.2
HADHAP40939 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.28■□□□□ 0.2
HADHAP40939 AL592309.1-201ENST00000443127 649 ntBASIC16.28■□□□□ 0.2
HADHAP40939 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.28■□□□□ 0.2
HADHAP40939 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.28■□□□□ 0.2
HADHAP40939 LINC01225-203ENST00000563550 1244 ntBASIC16.28■□□□□ 0.2
HADHAP40939 AP000842.3-202ENST00000569238 1080 ntBASIC16.28■□□□□ 0.2
HADHAP40939 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHAP40939 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 MIR4321-201ENST00000592276 80 ntBASIC16.28■□□□□ 0.2
HADHAP40939 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.28■□□□□ 0.2
HADHAP40939 AC105339.1-204ENST00000636249 355 ntBASIC16.28■□□□□ 0.2
HADHAP40939 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHAP40939 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHAP40939 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms