Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDE6BP35913 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PDE6BP35913 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDE6BP35913 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PDE6BP35913 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDE6BP35913 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDE6BP35913 BTBD6P1-201ENST00000412176 1267 ntBASIC19.58■□□□□ 0.72
PDE6BP35913 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.58■□□□□ 0.72
PDE6BP35913 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
PDE6BP35913 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.58■□□□□ 0.72
PDE6BP35913 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.58■□□□□ 0.72
PDE6BP35913 HNRNPUP1-201ENST00000554987 333 ntBASIC19.58■□□□□ 0.72
PDE6BP35913 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.58■□□□□ 0.72
PDE6BP35913 RN7SL190P-201ENST00000582519 257 ntBASIC19.58■□□□□ 0.72
PDE6BP35913 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.58■□□□□ 0.72
PDE6BP35913 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.58■□□□□ 0.72
PDE6BP35913 AC008894.3-201ENST00000624324 3103 ntBASIC19.58■□□□□ 0.72
PDE6BP35913 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDE6BP35913 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PDE6BP35913 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE6BP35913 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PDE6BP35913 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PDE6BP35913 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.57■□□□□ 0.72
PDE6BP35913 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.57■□□□□ 0.72
PDE6BP35913 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PDE6BP35913 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 IGHJ2P-201ENST00000454480 60 ntBASIC19.57■□□□□ 0.72
PDE6BP35913 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.57■□□□□ 0.72
PDE6BP35913 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.57■□□□□ 0.72
PDE6BP35913 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.57■□□□□ 0.72
PDE6BP35913 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.57■□□□□ 0.72
PDE6BP35913 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.57■□□□□ 0.72
PDE6BP35913 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.57■□□□□ 0.72
PDE6BP35913 AC244452.3-201ENST00000636814 210 ntBASIC19.57■□□□□ 0.72
PDE6BP35913 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.57■□□□□ 0.72
PDE6BP35913 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.57■□□□□ 0.72
PDE6BP35913 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.57■□□□□ 0.72
PDE6BP35913 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 REXO1L1P-202ENST00000608646 1974 ntBASIC19.57■□□□□ 0.72
PDE6BP35913 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6BP35913 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.57■□□□□ 0.72
PDE6BP35913 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.56■□□□□ 0.72
PDE6BP35913 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.56■□□□□ 0.72
PDE6BP35913 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDE6BP35913 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.56■□□□□ 0.72
PDE6BP35913 AL008638.5-201ENST00000623814 1298 ntBASIC19.56■□□□□ 0.72
PDE6BP35913 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDE6BP35913 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6BP35913 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.55■□□□□ 0.72
PDE6BP35913 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6BP35913 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.55■□□□□ 0.72
PDE6BP35913 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms