Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MRPL3P1-201ENST00000400109 1033 ntBASIC17.02■□□□□ 0.32
CTNNA1P35221 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNNA1P35221 AC140658.5-201ENST00000438532 169 ntBASIC17.02■□□□□ 0.32
CTNNA1P35221 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.02■□□□□ 0.32
CTNNA1P35221 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.02■□□□□ 0.32
CTNNA1P35221 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.02■□□□□ 0.32
CTNNA1P35221 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNNA1P35221 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.02■□□□□ 0.32
CTNNA1P35221 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.32
CTNNA1P35221 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CTNNA1P35221 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTNNA1P35221 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTNNA1P35221 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.02■□□□□ 0.31
CTNNA1P35221 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTNNA1P35221 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNNA1P35221 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNNA1P35221 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CTNNA1P35221 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 AC093909.1-201ENST00000504731 1122 ntBASIC17.01■□□□□ 0.31
CTNNA1P35221 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.01■□□□□ 0.31
CTNNA1P35221 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 AC023141.13-201ENST00000604991 943 ntBASIC17.01■□□□□ 0.31
CTNNA1P35221 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.01■□□□□ 0.31
CTNNA1P35221 AC007064.4-201ENST00000637740 555 ntBASIC17.01■□□□□ 0.31
CTNNA1P35221 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CTNNA1P35221 AC011477.6-201ENST00000604980 1927 ntBASIC17.01■□□□□ 0.31
CTNNA1P35221 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTNNA1P35221 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CTNNA1P35221 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.01■□□□□ 0.31
CTNNA1P35221 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNNA1P35221 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17■□□□□ 0.31
CTNNA1P35221 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CTNNA1P35221 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17■□□□□ 0.31
CTNNA1P35221 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17■□□□□ 0.31
CTNNA1P35221 AL450487.1-201ENST00000426799 995 ntBASIC17■□□□□ 0.31
CTNNA1P35221 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17■□□□□ 0.31
CTNNA1P35221 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17■□□□□ 0.31
CTNNA1P35221 AP001005.1-201ENST00000571755 1248 ntBASIC17■□□□□ 0.31
CTNNA1P35221 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17■□□□□ 0.31
CTNNA1P35221 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
CTNNA1P35221 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17■□□□□ 0.31
CTNNA1P35221 AL589702.1-201ENST00000641229 1509 ntBASIC17■□□□□ 0.31
CTNNA1P35221 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17■□□□□ 0.31
CTNNA1P35221 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17■□□□□ 0.31
CTNNA1P35221 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17■□□□□ 0.31
CTNNA1P35221 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CTNNA1P35221 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTNNA1P35221 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms