Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CD8B2-202ENST00000417670 633 ntBASIC18.85■□□□□ 0.61
COL4A5P29400 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.85■□□□□ 0.61
COL4A5P29400 AC092978.1-202ENST00000637590 1327 ntBASIC18.85■□□□□ 0.61
COL4A5P29400 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.85■□□□□ 0.61
COL4A5P29400 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.85■□□□□ 0.61
COL4A5P29400 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.85■□□□□ 0.61
COL4A5P29400 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
COL4A5P29400 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.85■□□□□ 0.61
COL4A5P29400 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COL4A5P29400 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
COL4A5P29400 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.85■□□□□ 0.61
COL4A5P29400 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COL4A5P29400 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.85■□□□□ 0.61
COL4A5P29400 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.85■□□□□ 0.61
COL4A5P29400 LDHBP1-201ENST00000455730 1119 ntBASIC18.85■□□□□ 0.61
COL4A5P29400 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COL4A5P29400 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.85■□□□□ 0.61
COL4A5P29400 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.85■□□□□ 0.61
COL4A5P29400 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.85■□□□□ 0.61
COL4A5P29400 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL4A5P29400 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL4A5P29400 ME2P1-201ENST00000426028 1970 ntBASIC18.85■□□□□ 0.61
COL4A5P29400 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.84■□□□□ 0.61
COL4A5P29400 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COL4A5P29400 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.84■□□□□ 0.61
COL4A5P29400 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.84■□□□□ 0.61
COL4A5P29400 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 AC126915.1-201ENST00000522847 1038 ntBASIC18.84■□□□□ 0.61
COL4A5P29400 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COL4A5P29400 AC018635.2-201ENST00000608625 364 ntBASIC18.84■□□□□ 0.61
COL4A5P29400 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
COL4A5P29400 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.84■□□□□ 0.61
COL4A5P29400 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A5P29400 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A5P29400 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COL4A5P29400 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A5P29400 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A5P29400 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A5P29400 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
COL4A5P29400 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.83■□□□□ 0.61
COL4A5P29400 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A5P29400 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.83■□□□□ 0.61
COL4A5P29400 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
COL4A5P29400 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A5P29400 FGFR3P5-201ENST00000564496 886 ntBASIC18.83■□□□□ 0.61
COL4A5P29400 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.83■□□□□ 0.61
COL4A5P29400 AC073413.1-201ENST00000603927 732 ntBASIC18.83■□□□□ 0.61
COL4A5P29400 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A5P29400 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A5P29400 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.83■□□□□ 0.6
COL4A5P29400 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A5P29400 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A5P29400 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A5P29400 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A5P29400 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A5P29400 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.83■□□□□ 0.6
COL4A5P29400 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.83■□□□□ 0.6
COL4A5P29400 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.83■□□□□ 0.6
COL4A5P29400 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
COL4A5P29400 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A5P29400 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A5P29400 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A5P29400 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A5P29400 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A5P29400 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.82■□□□□ 0.6
COL4A5P29400 SERPINA13P-202ENST00000478994 924 ntBASIC18.82■□□□□ 0.6
COL4A5P29400 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.82■□□□□ 0.6
COL4A5P29400 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.82■□□□□ 0.6
COL4A5P29400 AC138649.2-201ENST00000615886 705 ntBASIC18.82■□□□□ 0.6
COL4A5P29400 BX539320.1-201ENST00000623759 877 ntBASIC18.82■□□□□ 0.6
COL4A5P29400 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A5P29400 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A5P29400 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL4A5P29400 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A5P29400 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms