Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL035456.1-201ENST00000456064 1369 ntBASIC16.85■□□□□ 0.29
MMP8P22894 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP8P22894 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
MMP8P22894 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP8P22894 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP8P22894 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP8P22894 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP8P22894 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MMP8P22894 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP8P22894 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 HLA-J-203ENST00000494367 1087 ntBASIC16.84■□□□□ 0.29
MMP8P22894 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP8P22894 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 MIR4453-201ENST00000584019 89 ntBASIC16.84■□□□□ 0.29
MMP8P22894 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 RN7SL828P-201ENST00000607615 303 ntBASIC16.84■□□□□ 0.29
MMP8P22894 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MMP8P22894 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP8P22894 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MMP8P22894 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MMP8P22894 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP8P22894 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP8P22894 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP8P22894 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.83■□□□□ 0.29
MMP8P22894 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP8P22894 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
MMP8P22894 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP8P22894 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP8P22894 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.83■□□□□ 0.28
MMP8P22894 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 MIR1233-2-201ENST00000408138 82 ntBASIC16.83■□□□□ 0.28
MMP8P22894 MIR1233-1-201ENST00000408722 82 ntBASIC16.83■□□□□ 0.28
MMP8P22894 SPDYE7P-202ENST00000420373 878 ntBASIC16.83■□□□□ 0.28
MMP8P22894 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP8P22894 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP8P22894 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP8P22894 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 AC105250.1-201ENST00000509378 2057 ntBASIC16.83■□□□□ 0.28
MMP8P22894 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP8P22894 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP8P22894 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.83■□□□□ 0.28
MMP8P22894 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MMP8P22894 MIR6080-201ENST00000617359 66 ntBASIC16.83■□□□□ 0.28
MMP8P22894 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MMP8P22894 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MMP8P22894 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP8P22894 AC092127.1-201ENST00000567093 3455 ntBASIC16.83■□□□□ 0.28
MMP8P22894 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
MMP8P22894 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 222.3 ms