Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RFX1P22670 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX1P22670 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 AL512356.2-201ENST00000546955 174 ntBASIC17.51■□□□□ 0.39
RFX1P22670 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.51■□□□□ 0.39
RFX1P22670 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RFX1P22670 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX1P22670 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX1P22670 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.51■□□□□ 0.39
RFX1P22670 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RFX1P22670 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFX1P22670 AC011477.6-201ENST00000604980 1927 ntBASIC17.51■□□□□ 0.39
RFX1P22670 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 AP001282.1-201ENST00000531301 1499 ntBASIC17.5■□□□□ 0.39
RFX1P22670 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.5■□□□□ 0.39
RFX1P22670 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RFX1P22670 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RFX1P22670 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX1P22670 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 UGT1A2P-201ENST00000454886 866 ntBASIC17.5■□□□□ 0.39
RFX1P22670 AC105233.2-201ENST00000523697 349 ntBASIC17.5■□□□□ 0.39
RFX1P22670 AC069120.2-201ENST00000524091 540 ntBASIC17.5■□□□□ 0.39
RFX1P22670 AF228730.5-201ENST00000530288 346 ntBASIC17.5■□□□□ 0.39
RFX1P22670 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX1P22670 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX1P22670 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX1P22670 AL359881.2-201ENST00000602973 570 ntBASIC17.5■□□□□ 0.39
RFX1P22670 MIR6080-201ENST00000617359 66 ntBASIC17.5■□□□□ 0.39
RFX1P22670 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RFX1P22670 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.5■□□□□ 0.39
RFX1P22670 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFX1P22670 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX1P22670 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
RFX1P22670 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RFX1P22670 OR8S1-201ENST00000310194 1080 ntBASIC17.49■□□□□ 0.39
RFX1P22670 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.49■□□□□ 0.39
RFX1P22670 FAM58DP-201ENST00000428076 619 ntBASIC17.49■□□□□ 0.39
RFX1P22670 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.49■□□□□ 0.39
RFX1P22670 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.49■□□□□ 0.39
RFX1P22670 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RFX1P22670 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX1P22670 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.49■□□□□ 0.39
RFX1P22670 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.49■□□□□ 0.39
RFX1P22670 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RFX1P22670 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.49■□□□□ 0.39
RFX1P22670 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFX1P22670 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RFX1P22670 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.48■□□□□ 0.39
RFX1P22670 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFX1P22670 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.48■□□□□ 0.39
RFX1P22670 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms