Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 AC004987.2-201ENST00000395959 1148 ntBASIC16.23■□□□□ 0.19
HLA-DPA1P20036 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 SPDYE14P-201ENST00000442619 822 ntBASIC16.23■□□□□ 0.19
HLA-DPA1P20036 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 AC134407.2-201ENST00000625089 1978 ntBASIC16.23■□□□□ 0.19
HLA-DPA1P20036 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DPA1P20036 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 AC007950.2-201ENST00000615045 2347 ntBASIC16.22■□□□□ 0.19
HLA-DPA1P20036 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 DNAJB3-202ENST00000449667 1266 ntBASIC16.22■□□□□ 0.19
HLA-DPA1P20036 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 AC026150.2-201ENST00000564693 1156 ntBASIC16.22■□□□□ 0.19
HLA-DPA1P20036 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 AL596442.2-201ENST00000610240 980 ntBASIC16.22■□□□□ 0.19
HLA-DPA1P20036 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 MIR600HG-201ENST00000449175 5984 ntBASIC16.22■□□□□ 0.19
HLA-DPA1P20036 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.22■□□□□ 0.19
HLA-DPA1P20036 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPA1P20036 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 AP005117.1-202ENST00000581724 1908 ntBASIC16.21■□□□□ 0.19
HLA-DPA1P20036 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPA1P20036 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms