Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2B1P20020 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP2B1P20020 AC105233.2-201ENST00000523697 349 ntBASIC18.58■□□□□ 0.56
ATP2B1P20020 AF228730.5-201ENST00000530288 346 ntBASIC18.58■□□□□ 0.56
ATP2B1P20020 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2B1P20020 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
ATP2B1P20020 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP2B1P20020 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ATP2B1P20020 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2B1P20020 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ATP2B1P20020 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
ATP2B1P20020 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2B1P20020 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2B1P20020 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATP2B1P20020 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATP2B1P20020 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.57■□□□□ 0.56
ATP2B1P20020 MIR1233-2-201ENST00000408138 82 ntBASIC18.57■□□□□ 0.56
ATP2B1P20020 MIR1233-1-201ENST00000408722 82 ntBASIC18.57■□□□□ 0.56
ATP2B1P20020 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
ATP2B1P20020 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP2B1P20020 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP2B1P20020 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 LINC01225-203ENST00000563550 1244 ntBASIC18.57■□□□□ 0.56
ATP2B1P20020 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 AC073389.1-201ENST00000595595 795 ntBASIC18.57■□□□□ 0.56
ATP2B1P20020 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP2B1P20020 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 AC105339.1-204ENST00000636249 355 ntBASIC18.57■□□□□ 0.56
ATP2B1P20020 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATP2B1P20020 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2B1P20020 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2B1P20020 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP2B1P20020 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATP2B1P20020 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 AL136379.1-201ENST00000623471 2642 ntBASIC18.56■□□□□ 0.56
ATP2B1P20020 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ATP2B1P20020 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
ATP2B1P20020 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP2B1P20020 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATP2B1P20020 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP2B1P20020 AC005237.2-201ENST00000434368 219 ntBASIC18.56■□□□□ 0.56
ATP2B1P20020 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP2B1P20020 AC069335.1-201ENST00000489972 472 ntBASIC18.56■□□□□ 0.56
ATP2B1P20020 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.56■□□□□ 0.56
ATP2B1P20020 SLC25A39P2-201ENST00000537614 270 ntBASIC18.56■□□□□ 0.56
ATP2B1P20020 AP000842.3-202ENST00000569238 1080 ntBASIC18.56■□□□□ 0.56
ATP2B1P20020 AC055717.3-201ENST00000622967 595 ntBASIC18.56■□□□□ 0.56
ATP2B1P20020 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP2B1P20020 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ATP2B1P20020 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
ATP2B1P20020 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
ATP2B1P20020 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.56■□□□□ 0.56
ATP2B1P20020 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
ATP2B1P20020 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP2B1P20020 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms