Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 SLC7A15P-201ENST00000424028 1363 ntBASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AC099568.2-201ENST00000609194 695 ntBASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AL109936.8-201ENST00000641772 604 ntBASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AC008894.3-201ENST00000624324 3103 ntBASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40ALP0C0E4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 CYP4F24P-201ENST00000586049 1580 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC011270.2-201ENST00000624293 2550 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AP006294.1-201ENST00000415407 339 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC245100.5-201ENST00000452108 331 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SPDYE18-201ENST00000510091 1050 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 TPRX2P-201ENST00000535362 881 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC074044.1-201ENST00000609673 707 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 HLA-A-202ENST00000376806 1854 ntBASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40ALP0C0E4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40ALP0C0E4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms