Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.83■□□□□ 0.93
LTN1O94822 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.83■□□□□ 0.93
LTN1O94822 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LTN1O94822 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.83■□□□□ 0.93
LTN1O94822 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
LTN1O94822 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LTN1O94822 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LTN1O94822 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
LTN1O94822 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.82■□□□□ 0.92
LTN1O94822 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.82■□□□□ 0.92
LTN1O94822 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 AC011477.6-201ENST00000604980 1927 ntBASIC20.82■□□□□ 0.92
LTN1O94822 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.82■□□□□ 0.92
LTN1O94822 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 AC069224.1-201ENST00000566372 1715 ntBASIC20.82■□□□□ 0.92
LTN1O94822 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LTN1O94822 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LTN1O94822 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 CALR4P-201ENST00000431943 946 ntBASIC20.82■□□□□ 0.92
LTN1O94822 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.82■□□□□ 0.92
LTN1O94822 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 HSPB1P2-201ENST00000448722 546 ntBASIC20.82■□□□□ 0.92
LTN1O94822 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 ACTG1P17-201ENST00000558391 1119 ntBASIC20.82■□□□□ 0.92
LTN1O94822 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LTN1O94822 AL354989.2-201ENST00000435838 1540 ntBASIC20.82■□□□□ 0.92
LTN1O94822 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LTN1O94822 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 AC148477.4-201ENST00000613430 1793 ntBASIC20.81■□□□□ 0.92
LTN1O94822 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.81■□□□□ 0.92
LTN1O94822 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LTN1O94822 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.81■□□□□ 0.92
LTN1O94822 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.81■□□□□ 0.92
LTN1O94822 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.81■□□□□ 0.92
LTN1O94822 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.81■□□□□ 0.92
LTN1O94822 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.81■□□□□ 0.92
LTN1O94822 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 MIR4741-201ENST00000579822 90 ntBASIC20.81■□□□□ 0.92
LTN1O94822 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.81■□□□□ 0.92
LTN1O94822 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.81■□□□□ 0.92
LTN1O94822 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.81■□□□□ 0.92
LTN1O94822 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LTN1O94822 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.81■□□□□ 0.92
LTN1O94822 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LTN1O94822 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LTN1O94822 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTN1O94822 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.8■□□□□ 0.92
LTN1O94822 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LTN1O94822 AC006001.1-201ENST00000325130 474 ntBASIC20.8■□□□□ 0.92
LTN1O94822 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LTN1O94822 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.8■□□□□ 0.92
LTN1O94822 Z93015.1-201ENST00000451718 390 ntBASIC20.8■□□□□ 0.92
LTN1O94822 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.8■□□□□ 0.92
LTN1O94822 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.8■□□□□ 0.92
LTN1O94822 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.8■□□□□ 0.92
LTN1O94822 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.8■□□□□ 0.92
LTN1O94822 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.8■□□□□ 0.92
LTN1O94822 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms