Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PHF1O43189 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PHF1O43189 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
PHF1O43189 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
PHF1O43189 MIR943-201ENST00000401286 94 ntBASIC13.97□□□□□ -0.17
PHF1O43189 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.97□□□□□ -0.17
PHF1O43189 HMGA1P7-201ENST00000406908 502 ntBASIC13.97□□□□□ -0.17
PHF1O43189 TIMM8BP1-201ENST00000452384 211 ntBASIC13.97□□□□□ -0.17
PHF1O43189 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.97□□□□□ -0.17
PHF1O43189 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.97□□□□□ -0.17
PHF1O43189 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.97□□□□□ -0.17
PHF1O43189 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.97□□□□□ -0.17
PHF1O43189 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.97□□□□□ -0.17
PHF1O43189 MIR6752-201ENST00000618442 71 ntBASIC13.97□□□□□ -0.17
PHF1O43189 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 SLC22A20-204ENST00000530038 1673 ntBASIC13.97□□□□□ -0.17
PHF1O43189 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PHF1O43189 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.97□□□□□ -0.17
PHF1O43189 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHF1O43189 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.96□□□□□ -0.17
PHF1O43189 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.96□□□□□ -0.17
PHF1O43189 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.96□□□□□ -0.17
PHF1O43189 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
PHF1O43189 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 AL161772.1-201ENST00000610494 4412 ntBASIC13.96□□□□□ -0.17
PHF1O43189 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.96□□□□□ -0.17
PHF1O43189 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.96□□□□□ -0.17
PHF1O43189 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHF1O43189 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.96□□□□□ -0.17
PHF1O43189 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PHF1O43189 AC002056.1-201ENST00000395613 760 ntBASIC13.96□□□□□ -0.17
PHF1O43189 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.96□□□□□ -0.17
PHF1O43189 AL627223.1-201ENST00000416693 442 ntBASIC13.96□□□□□ -0.17
PHF1O43189 AC140658.5-201ENST00000438532 169 ntBASIC13.96□□□□□ -0.17
PHF1O43189 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms