Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM129A0AVI4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 HCG4-201ENST00000418983 998 ntBASIC14.58□□□□□ -0.08
TMEM129A0AVI4 MCCD1P2-201ENST00000423228 335 ntBASIC14.58□□□□□ -0.08
TMEM129A0AVI4 GPX1P2-201ENST00000429271 606 ntBASIC14.58□□□□□ -0.08
TMEM129A0AVI4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CXCL1P1-201ENST00000502804 216 ntBASIC14.58□□□□□ -0.08
TMEM129A0AVI4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 AC010327.4-202ENST00000591484 748 ntBASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.58□□□□□ -0.08
TMEM129A0AVI4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 DNAJB3-201ENST00000446806 729 ntBASIC14.57□□□□□ -0.08
TMEM129A0AVI4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AC005412.3-201ENST00000580309 715 ntBASIC14.57□□□□□ -0.08
TMEM129A0AVI4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 ACTL9-202ENST00000612068 1252 ntBASIC14.57□□□□□ -0.08
TMEM129A0AVI4 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 BCAR1-209ENST00000546196 1340 ntBASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AC129492.6-201ENST00000611383 1305 ntBASIC14.57□□□□□ -0.08
TMEM129A0AVI4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 AL009178.2-201ENST00000597278 2719 ntBASIC14.57□□□□□ -0.08
TMEM129A0AVI4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM129A0AVI4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TMEM129A0AVI4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM129A0AVI4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM129A0AVI4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM129A0AVI4 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.56□□□□□ -0.08
TMEM129A0AVI4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM129A0AVI4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.56□□□□□ -0.08
TMEM129A0AVI4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TMEM129A0AVI4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms