Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 RPS2P1-201ENST00000434010 821 ntBASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 MIR3652-201ENST00000579335 131 ntBASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AC091076.1-201ENST00000610741 619 ntBASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AL121772.3-201ENST00000610840 674 ntBASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AC092127.1-201ENST00000567093 3455 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AL009178.2-201ENST00000597278 2719 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 CICP24-201ENST00000605464 2705 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AC106881.1-201ENST00000605849 3329 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 KRT18P27-201ENST00000427733 1299 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AC136632.2-201ENST00000512891 861 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AC091304.2-201ENST00000564639 760 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 AC008667.4-201ENST00000607370 168 ntBASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV5A0A0B4J249 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TRAV5A0A0B4J249 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms