Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 FAM86C2P-203ENST00000528684 1004 ntBASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 MTDHP5-201ENST00000598980 586 ntBASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 REXO1L8P-201ENST00000604378 1897 ntBASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 YBX2P1-201ENST00000394192 760 ntBASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AL355306.1-201ENST00000415580 579 ntBASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 ACTG1P14-201ENST00000446382 1122 ntBASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AC093724.1-201ENST00000448659 1027 ntBASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 RN7SL589P-201ENST00000481268 310 ntBASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AL671883.3-201ENST00000603274 991 ntBASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HLA-DRB4X5D2U9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AL592424.1-201ENST00000563624 1536 ntBASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms