Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 AL355306.1-201ENST00000415580 579 ntBASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 AC245100.5-201ENST00000452108 331 ntBASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 AL135744.1-201ENST00000565098 629 ntBASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 AC010327.4-202ENST00000591484 748 ntBASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 AC092902.6-201ENST00000641783 218 ntBASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPF3BQ9BZI7 AC103702.1-201ENST00000548801 2630 ntBASIC19.21■□□□□ 0.66
UPF3BQ9BZI7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 FAM58CP-201ENST00000435741 640 ntBASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 AC004967.1-201ENST00000453589 447 ntBASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 AC073389.1-201ENST00000595595 795 ntBASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPF3BQ9BZI7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 AC018892.3-201ENST00000623986 2499 ntBASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPF3BQ9BZI7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms