Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 AC004987.2-201ENST00000395959 1148 ntBASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 AP000347.1-202ENST00000435868 847 ntBASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 RNA5SP410-201ENST00000516285 106 ntBASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 SLC25A39P2-201ENST00000537614 270 ntBASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 AC024267.1-201ENST00000582320 895 ntBASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RSPO3Q9BXY4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 YBX2P1-201ENST00000394192 760 ntBASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AC004832.2-201ENST00000426397 482 ntBASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 FAM58DP-201ENST00000428076 619 ntBASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO3Q9BXY4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.71□□□□□ -0.06
RSPO3Q9BXY4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 MST1L-201ENST00000442552 2185 ntBASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RSPO3Q9BXY4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms