Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC027601.4-201ENST00000611259 610 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 AC004790.2-201ENST00000623588 572 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 AP002414.2-201ENST00000591780 3365 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 MIR648-201ENST00000385046 94 ntBASIC14.73□□□□□ -0.05
SNX18Q96RF0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 PMS2P4-201ENST00000412466 1052 ntBASIC14.73□□□□□ -0.05
SNX18Q96RF0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 AL603832.2-201ENST00000566195 2125 ntBASIC14.73□□□□□ -0.05
SNX18Q96RF0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.73□□□□□ -0.05
SNX18Q96RF0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNX18Q96RF0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SNX18Q96RF0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 AL592424.1-201ENST00000563624 1536 ntBASIC14.72□□□□□ -0.05
SNX18Q96RF0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 AL031432.2-201ENST00000566714 459 ntBASIC14.72□□□□□ -0.05
SNX18Q96RF0 AL928711.1-201ENST00000570165 459 ntBASIC14.72□□□□□ -0.05
SNX18Q96RF0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 AC140113.2-201ENST00000604370 208 ntBASIC14.72□□□□□ -0.05
SNX18Q96RF0 AL031055.1-201ENST00000606362 631 ntBASIC14.72□□□□□ -0.05
SNX18Q96RF0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms