Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHAMP1Q96JM3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 KRT18P67-201ENST00000432816 1264 ntBASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 AL121912.1-201ENST00000603683 238 ntBASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 AC073439.1-201ENST00000624121 1774 ntBASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CHAMP1Q96JM3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 AC098831.1-202ENST00000438821 336 ntBASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 AL662844.1-201ENST00000546340 181 ntBASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 AL031432.2-201ENST00000566714 459 ntBASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 AL928711.1-201ENST00000570165 459 ntBASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 AC026748.1-201ENST00000624349 3251 ntBASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHAMP1Q96JM3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 CICP23-201ENST00000605013 2741 ntBASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms