Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 GPX1P2-201ENST00000429271 606 ntBASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 AC145285.3-201ENST00000564603 959 ntBASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 AL513477.1-201ENST00000602865 2407 ntBASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 AC018892.3-201ENST00000623986 2499 ntBASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATG4AQ8WYN0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AC023157.3-201ENST00000619086 2088 ntBASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AL138918.1-201ENST00000568306 659 ntBASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AL513190.1-201ENST00000621254 727 ntBASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AC009090.5-201ENST00000624886 2285 ntBASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 AC138035.3-201ENST00000622706 2791 ntBASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATG4AQ8WYN0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 AC068137.2-201ENST00000605408 478 ntBASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 AC006486.2-201ENST00000624246 2199 ntBASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms