Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP1Q8TDR0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP1Q8TDR0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP1Q8TDR0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAF3IP1Q8TDR0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP1Q8TDR0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP1Q8TDR0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 AP005117.1-202ENST00000581724 1908 ntBASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 AL162727.3-201ENST00000635661 2787 ntBASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP1Q8TDR0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AKAP8P1-201ENST00000434743 1349 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AL355306.1-201ENST00000415580 579 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AL671277.1-201ENST00000429656 993 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AC105233.2-201ENST00000523697 349 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 KRT18P58-201ENST00000527480 1120 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AF228730.5-201ENST00000530288 346 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 AL135744.1-201ENST00000565098 629 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MIR4321-201ENST00000592276 80 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 HYMAI-201ENST00000635591 3347 ntBASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF3IP1Q8TDR0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF3IP1Q8TDR0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms