Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 TSPY16P-201ENST00000449843 468 ntBASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 IGHV3-42-201ENST00000520410 361 ntBASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 AC026150.2-201ENST00000564693 1156 ntBASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 MIR3909-201ENST00000579518 119 ntBASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 AC105917.1-201ENST00000506637 2539 ntBASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FBXO39Q8N4B4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 AL592424.1-201ENST00000563624 1536 ntBASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 TERF1P3-201ENST00000505638 1227 ntBASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 AC140878.1-201ENST00000565277 250 ntBASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FBXO39Q8N4B4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
FBXO39Q8N4B4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms