Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AL355306.1-201ENST00000415580 579 ntBASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AL135744.1-201ENST00000565098 629 ntBASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 FAM197Y3-203ENST00000618346 717 ntBASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 AP001282.1-201ENST00000531301 1499 ntBASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 AC020658.6-201ENST00000623564 1870 ntBASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 SPTSSB-204ENST00000617024 1292 ntBASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 AC018892.3-201ENST00000623986 2499 ntBASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC83Q8IWF9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 AC092127.1-201ENST00000567093 3455 ntBASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 AL671277.1-201ENST00000429656 993 ntBASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 FAM58CP-201ENST00000435741 640 ntBASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 AC061975.2-201ENST00000581722 295 ntBASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 AC027307.2-201ENST00000591252 911 ntBASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC83Q8IWF9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms