Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 AC009542.2-202ENST00000619004 1067 ntBASIC19.61■□□□□ 0.73
CCDC93Q567U6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC93Q567U6 AC006538.1-201ENST00000567905 1585 ntBASIC19.61■□□□□ 0.73
CCDC93Q567U6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC93Q567U6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 LINC01144-201ENST00000626198 1710 ntBASIC19.6■□□□□ 0.73
CCDC93Q567U6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 BAATP1-201ENST00000412284 1225 ntBASIC19.6■□□□□ 0.73
CCDC93Q567U6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 AC016694.1-201ENST00000434179 700 ntBASIC19.6■□□□□ 0.73
CCDC93Q567U6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 RPL13AP20-201ENST00000459725 609 ntBASIC19.6■□□□□ 0.73
CCDC93Q567U6 ZNF767P-206ENST00000513792 565 ntBASIC19.6■□□□□ 0.73
CCDC93Q567U6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 AC120045.2-201ENST00000567334 178 ntBASIC19.6■□□□□ 0.73
CCDC93Q567U6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC93Q567U6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC93Q567U6 KRT8P37-201ENST00000451609 1420 ntBASIC19.59■□□□□ 0.73
CCDC93Q567U6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 AL691432.1-201ENST00000596308 1422 ntBASIC19.59■□□□□ 0.73
CCDC93Q567U6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 C1QBPP1-201ENST00000400117 770 ntBASIC19.59■□□□□ 0.73
CCDC93Q567U6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 TARDBPP1-201ENST00000442013 1203 ntBASIC19.59■□□□□ 0.73
CCDC93Q567U6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 RN7SL560P-201ENST00000577943 264 ntBASIC19.59■□□□□ 0.73
CCDC93Q567U6 CLUHP6-201ENST00000580789 941 ntBASIC19.59■□□□□ 0.73
CCDC93Q567U6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC93Q567U6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC93Q567U6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC93Q567U6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC93Q567U6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC93Q567U6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms