Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.7■□□□□ 0.74
DDR1Q08345 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.7■□□□□ 0.74
DDR1Q08345 AHCYP2-201ENST00000430630 1300 ntBASIC19.7■□□□□ 0.74
DDR1Q08345 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDR1Q08345 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.69■□□□□ 0.74
DDR1Q08345 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
DDR1Q08345 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DDR1Q08345 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.69■□□□□ 0.74
DDR1Q08345 MIR1202-201ENST00000408529 83 ntBASIC19.69■□□□□ 0.74
DDR1Q08345 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.69■□□□□ 0.74
DDR1Q08345 MTX1P1-201ENST00000440904 838 ntBASIC19.69■□□□□ 0.74
DDR1Q08345 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.69■□□□□ 0.74
DDR1Q08345 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.69■□□□□ 0.74
DDR1Q08345 AC104982.3-201ENST00000581995 514 ntBASIC19.69■□□□□ 0.74
DDR1Q08345 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DDR1Q08345 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.69■□□□□ 0.74
DDR1Q08345 AL096828.3-201ENST00000615354 462 ntBASIC19.69■□□□□ 0.74
DDR1Q08345 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
DDR1Q08345 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDR1Q08345 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DDR1Q08345 PRORSD1P-202ENST00000563365 2154 ntBASIC19.68■□□□□ 0.74
DDR1Q08345 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DDR1Q08345 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.68■□□□□ 0.74
DDR1Q08345 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DDR1Q08345 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.68■□□□□ 0.74
DDR1Q08345 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
DDR1Q08345 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.68■□□□□ 0.74
DDR1Q08345 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
DDR1Q08345 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.68■□□□□ 0.74
DDR1Q08345 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DDR1Q08345 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.68■□□□□ 0.74
DDR1Q08345 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.68■□□□□ 0.74
DDR1Q08345 EIF4HP1-201ENST00000453115 687 ntBASIC19.68■□□□□ 0.74
DDR1Q08345 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
DDR1Q08345 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.68■□□□□ 0.74
DDR1Q08345 AC015967.2-201ENST00000624092 234 ntBASIC19.68■□□□□ 0.74
DDR1Q08345 AC006435.4-201ENST00000625037 234 ntBASIC19.68■□□□□ 0.74
DDR1Q08345 AL356737.1-201ENST00000634391 234 ntBASIC19.68■□□□□ 0.74
DDR1Q08345 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.68■□□□□ 0.74
DDR1Q08345 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.68■□□□□ 0.74
DDR1Q08345 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.68■□□□□ 0.74
DDR1Q08345 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDR1Q08345 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.67■□□□□ 0.74
DDR1Q08345 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
DDR1Q08345 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.67■□□□□ 0.74
DDR1Q08345 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
DDR1Q08345 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DDR1Q08345 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.67■□□□□ 0.74
DDR1Q08345 HOMER2P2-201ENST00000451621 847 ntBASIC19.67■□□□□ 0.74
DDR1Q08345 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
DDR1Q08345 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.67■□□□□ 0.74
DDR1Q08345 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.67■□□□□ 0.74
DDR1Q08345 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.67■□□□□ 0.74
DDR1Q08345 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.67■□□□□ 0.74
DDR1Q08345 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDR1Q08345 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.67■□□□□ 0.74
DDR1Q08345 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms