Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 AC007787.1-201ENST00000588095 1583 ntBASIC21.09■□□□□ 0.97
COL16A1Q07092 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.09■□□□□ 0.97
COL16A1Q07092 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
COL16A1Q07092 AC073150.1-201ENST00000450406 1084 ntBASIC21.09■□□□□ 0.97
COL16A1Q07092 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC21.09■□□□□ 0.97
COL16A1Q07092 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.09■□□□□ 0.97
COL16A1Q07092 RBM8B-201ENST00000555532 525 ntBASIC21.09■□□□□ 0.97
COL16A1Q07092 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC21.09■□□□□ 0.97
COL16A1Q07092 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC21.09■□□□□ 0.97
COL16A1Q07092 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.09■□□□□ 0.97
COL16A1Q07092 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.09■□□□□ 0.97
COL16A1Q07092 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL16A1Q07092 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
COL16A1Q07092 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.09■□□□□ 0.97
COL16A1Q07092 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL16A1Q07092 AC134043.2-201ENST00000624206 2238 ntBASIC21.09■□□□□ 0.97
COL16A1Q07092 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC21.09■□□□□ 0.97
COL16A1Q07092 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL16A1Q07092 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
COL16A1Q07092 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC21.08■□□□□ 0.97
COL16A1Q07092 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC21.08■□□□□ 0.97
COL16A1Q07092 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
COL16A1Q07092 AL022344.2-201ENST00000568976 968 ntBASIC21.08■□□□□ 0.97
COL16A1Q07092 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC21.08■□□□□ 0.97
COL16A1Q07092 AC242376.2-201ENST00000619355 883 ntBASIC21.08■□□□□ 0.97
COL16A1Q07092 PCBP2-OT1-201ENST00000634357 590 ntBASIC21.08■□□□□ 0.97
COL16A1Q07092 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC21.08■□□□□ 0.97
COL16A1Q07092 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
COL16A1Q07092 AC134407.2-201ENST00000625089 1978 ntBASIC21.08■□□□□ 0.97
COL16A1Q07092 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.08■□□□□ 0.97
COL16A1Q07092 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL16A1Q07092 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.08■□□□□ 0.97
COL16A1Q07092 AC060834.1-201ENST00000443027 2032 ntBASIC21.08■□□□□ 0.97
COL16A1Q07092 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL16A1Q07092 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
COL16A1Q07092 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC21.08■□□□□ 0.96
COL16A1Q07092 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
COL16A1Q07092 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL16A1Q07092 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC21.07■□□□□ 0.96
COL16A1Q07092 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC21.07■□□□□ 0.96
COL16A1Q07092 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.07■□□□□ 0.96
COL16A1Q07092 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
COL16A1Q07092 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
COL16A1Q07092 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC21.07■□□□□ 0.96
COL16A1Q07092 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.07■□□□□ 0.96
COL16A1Q07092 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
COL16A1Q07092 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL16A1Q07092 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.07■□□□□ 0.96
COL16A1Q07092 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.07■□□□□ 0.96
COL16A1Q07092 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
COL16A1Q07092 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL16A1Q07092 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC21.07■□□□□ 0.96
COL16A1Q07092 AL136309.1-201ENST00000403917 691 ntBASIC21.07■□□□□ 0.96
COL16A1Q07092 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
COL16A1Q07092 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL16A1Q07092 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.07■□□□□ 0.96
COL16A1Q07092 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.07■□□□□ 0.96
COL16A1Q07092 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.07■□□□□ 0.96
COL16A1Q07092 AC007881.3-201ENST00000608897 607 ntBASIC21.07■□□□□ 0.96
COL16A1Q07092 MIR6842-201ENST00000612539 65 ntBASIC21.07■□□□□ 0.96
COL16A1Q07092 ANKRD30BP2-201ENST00000435744 1610 ntBASIC21.07■□□□□ 0.96
COL16A1Q07092 KRT8P4-201ENST00000509735 1454 ntBASIC21.07■□□□□ 0.96
COL16A1Q07092 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL16A1Q07092 AL157791.1-201ENST00000553667 1699 ntBASIC21.06■□□□□ 0.96
COL16A1Q07092 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC21.06■□□□□ 0.96
COL16A1Q07092 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL16A1Q07092 AC004899.1-201ENST00000424687 1714 ntBASIC21.06■□□□□ 0.96
COL16A1Q07092 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
COL16A1Q07092 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
COL16A1Q07092 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL16A1Q07092 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL16A1Q07092 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC21.06■□□□□ 0.96
COL16A1Q07092 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL16A1Q07092 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC21.06■□□□□ 0.96
COL16A1Q07092 EIF3FP3-201ENST00000434851 1086 ntBASIC21.06■□□□□ 0.96
COL16A1Q07092 POU5F1P6-201ENST00000466990 990 ntBASIC21.06■□□□□ 0.96
COL16A1Q07092 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms