Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.23■□□□□ 0.99
ZC3H6P61129 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 AL121723.1-201ENST00000445194 1519 ntBASIC21.23■□□□□ 0.99
ZC3H6P61129 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H6P61129 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.23■□□□□ 0.99
ZC3H6P61129 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.23■□□□□ 0.99
ZC3H6P61129 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ZC3H6P61129 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H6P61129 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3H6P61129 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3H6P61129 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZC3H6P61129 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZC3H6P61129 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC21.22■□□□□ 0.99
ZC3H6P61129 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H6P61129 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
ZC3H6P61129 AC007969.1-201ENST00000433675 447 ntBASIC21.22■□□□□ 0.99
ZC3H6P61129 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.22■□□□□ 0.99
ZC3H6P61129 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.22■□□□□ 0.99
ZC3H6P61129 AC078819.1-201ENST00000547454 765 ntBASIC21.22■□□□□ 0.99
ZC3H6P61129 AC012085.1-201ENST00000548270 765 ntBASIC21.22■□□□□ 0.99
ZC3H6P61129 MIR4741-201ENST00000579822 90 ntBASIC21.22■□□□□ 0.99
ZC3H6P61129 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3H6P61129 AC000095.1-201ENST00000603208 874 ntBASIC21.22■□□□□ 0.99
ZC3H6P61129 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.22■□□□□ 0.99
ZC3H6P61129 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.22■□□□□ 0.99
ZC3H6P61129 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 AC005052.1-201ENST00000625181 2492 ntBASIC21.22■□□□□ 0.99
ZC3H6P61129 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ZC3H6P61129 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZC3H6P61129 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H6P61129 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H6P61129 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 DRD5P1-201ENST00000456605 1438 ntBASIC21.21■□□□□ 0.99
ZC3H6P61129 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 REXO1L1P-202ENST00000608646 1974 ntBASIC21.21■□□□□ 0.99
ZC3H6P61129 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3H6P61129 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ZC3H6P61129 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 ACKR1-201ENST00000368121 1240 ntBASIC21.21■□□□□ 0.99
ZC3H6P61129 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 AC136604.1-201ENST00000418535 575 ntBASIC21.21■□□□□ 0.99
ZC3H6P61129 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3H6P61129 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.21■□□□□ 0.99
ZC3H6P61129 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.21■□□□□ 0.99
ZC3H6P61129 OARD1-212ENST00000482515 832 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 AC026410.3-201ENST00000514280 936 ntBASIC21.21■□□□□ 0.99
ZC3H6P61129 AP001582.1-201ENST00000525856 295 ntBASIC21.21■□□□□ 0.99
ZC3H6P61129 ACTG1P17-201ENST00000558391 1119 ntBASIC21.21■□□□□ 0.99
ZC3H6P61129 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.21■□□□□ 0.99
ZC3H6P61129 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.21■□□□□ 0.99
ZC3H6P61129 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H6P61129 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H6P61129 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZC3H6P61129 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H6P61129 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.2■□□□□ 0.98
ZC3H6P61129 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H6P61129 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H6P61129 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H6P61129 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H6P61129 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H6P61129 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.2■□□□□ 0.98
ZC3H6P61129 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3H6P61129 NEU3-202ENST00000526068 431 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3H6P61129 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.2■□□□□ 0.98
ZC3H6P61129 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms